Cluster: A49.CMAG_4_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_1089 | A49_contig_1089_742 | 846566 | 848050 | + | GH43_35 |
| pfam | A49_contig_1089 | A49_contig_1089_743 | 848066 | 849571 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| TC | A49_contig_1089 | A49_contig_1089_744 | 849657 | 850826 | - | 2.A.4.7.6 |
Gene ID: A49_contig_1089_742
Type: CAZyme
Location: 846566 - 848050 (+)
Type: CAZyme
Location: 846566 - 848050 (+)
Gene ID: A49_contig_1089_743
Type: pfam
Location: 848066 - 849571 (+)
Type: pfam
Location: 848066 - 849571 (+)
Gene ID: A49_contig_1089_744
Type: TC
Location: 849657 - 850826 (-)
Type: TC
Location: 849657 - 850826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_742 | vegan > omnivore | 1.96310 | 0.00068 |
| A49_contig_1089_742 | vegetarian > omnivore | 1.81643 | 0.00341 |
| A49_contig_1089_744 | vegan > omnivore | 1.83716 | 0.00068 |
| A49_contig_1089_744 | vegetarian > omnivore | 1.69445 | 0.00341 |