Cluster: A49.CMAG_4_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_1089 | A49_contig_1089_2203 | 2538018 | 2539310 | + | 2.A.49.9.2 |
| pfam | A49_contig_1089 | A49_contig_1089_2204 | 2539307 | 2540200 | + | EamA |
| CAZyme | A49_contig_1089 | A49_contig_1089_2205 | 2540312 | 2543800 | - | CBM22 | CBM22 | CBM9 | GH10 |
Gene ID: A49_contig_1089_2203
Type: TC
Location: 2538018 - 2539310 (+)
Type: TC
Location: 2538018 - 2539310 (+)
Gene ID: A49_contig_1089_2204
Type: pfam
Location: 2539307 - 2540200 (+)
Type: pfam
Location: 2539307 - 2540200 (+)
Gene ID: A49_contig_1089_2205
Type: CAZyme
Location: 2540312 - 2543800 (-)
Type: CAZyme
Location: 2540312 - 2543800 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_2203 | vegan > omnivore | 1.73130 | 0.00068 |
| A49_contig_1089_2203 | vegetarian > omnivore | 1.26988 | 0.00341 |
| A49_contig_1089_2204 | vegan > omnivore | 1.04394 | 0.00068 |
| A49_contig_1089_2204 | vegetarian > omnivore | 1.26719 | 0.00341 |