Cluster: A49.CMAG_4_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_1089 | A49_contig_1089_2165 | 2493444 | 2496206 | - | CBM3 | GH9 |
| TF | A49_contig_1089 | A49_contig_1089_2166 | 2496404 | 2496709 | - | Trp_repressor |
| TC | A49_contig_1089 | A49_contig_1089_2167 | 2497146 | 2498867 | - | 1.A.11.2.7 |
| TC | A49_contig_1089 | A49_contig_1089_2168 | 2499115 | 2499948 | - | 3.A.1.132.3 |
Gene ID: A49_contig_1089_2165
Type: CAZyme
Location: 2493444 - 2496206 (-)
Type: CAZyme
Location: 2493444 - 2496206 (-)
Gene ID: A49_contig_1089_2166
Type: TF
Location: 2496404 - 2496709 (-)
Type: TF
Location: 2496404 - 2496709 (-)
Gene ID: A49_contig_1089_2167
Type: TC
Location: 2497146 - 2498867 (-)
Type: TC
Location: 2497146 - 2498867 (-)
Gene ID: A49_contig_1089_2168
Type: TC
Location: 2499115 - 2499948 (-)
Type: TC
Location: 2499115 - 2499948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_2166 | vegan > omnivore | 1.84570 | 0.00068 |
| A49_contig_1089_2166 | vegetarian > omnivore | 1.56150 | 0.00341 |