Cluster: A49.CMAG_4_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_1089 | A49_contig_1089_1589 | 1817840 | 1818415 | - | 4.F.1.1.8 |
| pfam | A49_contig_1089 | A49_contig_1089_1590 | 1818399 | 1819742 | - | UPF0004 | Radical_SAM | TRAM_2 |
| CAZyme | A49_contig_1089 | A49_contig_1089_1591 | 1819857 | 1820849 | - | CE4 |
Gene ID: A49_contig_1089_1589
Type: TC
Location: 1817840 - 1818415 (-)
Type: TC
Location: 1817840 - 1818415 (-)
Gene ID: A49_contig_1089_1590
Type: pfam
Location: 1818399 - 1819742 (-)
Type: pfam
Location: 1818399 - 1819742 (-)
Gene ID: A49_contig_1089_1591
Type: CAZyme
Location: 1819857 - 1820849 (-)
Type: CAZyme
Location: 1819857 - 1820849 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_1591 | vegan > omnivore | 1.60310 | 0.00068 |
| A49_contig_1089_1591 | vegetarian > omnivore | 1.52455 | 0.00341 |