Cluster: A49.CMAG_4_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_1089 | A49_contig_1089_1171 | 1351075 | 1352208 | - | GT28 |
| TC | A49_contig_1089 | A49_contig_1089_1172 | 1352205 | 1353455 | - | 2.A.103.1.3 |
| TC | A49_contig_1089 | A49_contig_1089_1173 | 1353474 | 1354502 | - | 9.B.146.1.3 |
Gene ID: A49_contig_1089_1171
Type: CAZyme
Location: 1351075 - 1352208 (-)
Type: CAZyme
Location: 1351075 - 1352208 (-)
Gene ID: A49_contig_1089_1172
Type: TC
Location: 1352205 - 1353455 (-)
Type: TC
Location: 1352205 - 1353455 (-)
Gene ID: A49_contig_1089_1173
Type: TC
Location: 1353474 - 1354502 (-)
Type: TC
Location: 1353474 - 1354502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_1172 | vegan > omnivore | 1.46125 | 0.00068 |
| A49_contig_1089_1172 | vegetarian > omnivore | 1.44260 | 0.00341 |