Cluster: A49.CMAG_1_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_1
- CGC Family ID: CGCFAM_04440
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_3161 | A49_contig_3161_248 | 283289 | 284581 | + | 2.A.103.1.3 |
| TC | A49_contig_3161 | A49_contig_3161_249 | 284603 | 285868 | + | 2.A.40.1.1 |
| pfam | A49_contig_3161 | A49_contig_3161_250 | 285895 | 286974 | + | Radical_SAM |
| pfam | A49_contig_3161 | A49_contig_3161_251 | 287421 | 288398 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | A49_contig_3161 | A49_contig_3161_252 | 288417 | 289223 | + | CE4 |
Gene ID: A49_contig_3161_248
Type: TC
Location: 283289 - 284581 (+)
Type: TC
Location: 283289 - 284581 (+)
Gene ID: A49_contig_3161_249
Type: TC
Location: 284603 - 285868 (+)
Type: TC
Location: 284603 - 285868 (+)
Gene ID: A49_contig_3161_250
Type: pfam
Location: 285895 - 286974 (+)
Type: pfam
Location: 285895 - 286974 (+)
Gene ID: A49_contig_3161_251
Type: pfam
Location: 287421 - 288398 (+)
Type: pfam
Location: 287421 - 288398 (+)
Gene ID: A49_contig_3161_252
Type: CAZyme
Location: 288417 - 289223 (+)
Type: CAZyme
Location: 288417 - 289223 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp000417505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.