Cluster: A49.CMAG_1_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A49.CMAG_1
- CGC Family ID: CGCFAM_04439
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_3161 | A49_contig_3161_69 | 81983 | 83137 | + | CE9 |
| CAZyme | A49_contig_3161 | A49_contig_3161_70 | 83124 | 84275 | + | GH3 |
| pfam | A49_contig_3161 | A49_contig_3161_71 | 84269 | 85156 | - | ROK |
| pfam | A49_contig_3161 | A49_contig_3161_72 | 85274 | 87118 | + | Alk_phosphatase |
| TC | A49_contig_3161 | A49_contig_3161_73 | 87328 | 88164 | - | 3.A.1.132.3 |
Gene ID: A49_contig_3161_69
Type: CAZyme
Location: 81983 - 83137 (+)
Type: CAZyme
Location: 81983 - 83137 (+)
Gene ID: A49_contig_3161_70
Type: CAZyme
Location: 83124 - 84275 (+)
Type: CAZyme
Location: 83124 - 84275 (+)
Gene ID: A49_contig_3161_71
Type: pfam
Location: 84269 - 85156 (-)
Type: pfam
Location: 84269 - 85156 (-)
Gene ID: A49_contig_3161_72
Type: pfam
Location: 85274 - 87118 (+)
Type: pfam
Location: 85274 - 87118 (+)
Gene ID: A49_contig_3161_73
Type: TC
Location: 87328 - 88164 (-)
Type: TC
Location: 87328 - 88164 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp000417505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.