Cluster: A49.CMAG_1_CGC18
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: A49.CMAG_1
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_3161 | A49_contig_3161_1929 | 2146503 | 2147147 | - | GT14 |
| pfam | A49_contig_3161 | A49_contig_3161_1930 | 2147361 | 2148710 | - | DDE_Tnp_1 | DDE_5 |
| NULL(UNKNOWN) | A49_contig_3161 | A49_contig_3161_1931 | 2149195 | 2149842 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A49_contig_3161 | A49_contig_3161_1932 | 2149896 | 2150837 | - | GT2 |
| CAZyme | A49_contig_3161 | A49_contig_3161_1933 | 2150867 | 2151943 | - | GT4 |
| pfam | A49_contig_3161 | A49_contig_3161_1934 | 2152009 | 2153178 | - | GmrSD_N |
| pfam | A49_contig_3161 | A49_contig_3161_1935 | 2153181 | 2153972 | - | FRG |
| CAZyme | A49_contig_3161 | A49_contig_3161_1936 | 2154009 | 2154830 | - | GT2 |
| TC | A49_contig_3161 | A49_contig_3161_1937 | 2154985 | 2156367 | - | 9.B.18.1.3 |
Gene ID: A49_contig_3161_1929
Type: CAZyme
Location: 2146503 - 2147147 (-)
Type: CAZyme
Location: 2146503 - 2147147 (-)
Gene ID: A49_contig_3161_1930
Type: pfam
Location: 2147361 - 2148710 (-)
Type: pfam
Location: 2147361 - 2148710 (-)
Gene ID: A49_contig_3161_1931
Type:
Location: 2149195 - 2149842 (-)
Type:
Location: 2149195 - 2149842 (-)
Gene ID: A49_contig_3161_1932
Type: CAZyme
Location: 2149896 - 2150837 (-)
Type: CAZyme
Location: 2149896 - 2150837 (-)
Gene ID: A49_contig_3161_1933
Type: CAZyme
Location: 2150867 - 2151943 (-)
Type: CAZyme
Location: 2150867 - 2151943 (-)
Gene ID: A49_contig_3161_1934
Type: pfam
Location: 2152009 - 2153178 (-)
Type: pfam
Location: 2152009 - 2153178 (-)
Gene ID: A49_contig_3161_1935
Type: pfam
Location: 2153181 - 2153972 (-)
Type: pfam
Location: 2153181 - 2153972 (-)
Gene ID: A49_contig_3161_1936
Type: CAZyme
Location: 2154009 - 2154830 (-)
Type: CAZyme
Location: 2154009 - 2154830 (-)
Gene ID: A49_contig_3161_1937
Type: TC
Location: 2154985 - 2156367 (-)
Type: TC
Location: 2154985 - 2156367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp000417505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.