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Cluster: A49.CMAG_1_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A49_contig_3161 A49_contig_3161_1187 1304107 1305171 - 3.A.1.11.7
TC A49_contig_3161 A49_contig_3161_1188 1305187 1305966 - 3.A.1.11.1
TC A49_contig_3161 A49_contig_3161_1189 1305966 1306793 - 3.A.1.11.1
TC A49_contig_3161 A49_contig_3161_1190 1306786 1307856 - 3.A.1.11.8
CAZyme A49_contig_3161 A49_contig_3161_1191 1307946 1308692 - GH23
NULL(UNKNOWN) A49_contig_3161 A49_contig_3161_1192 1308831 1309073 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase A49_contig_3161 A49_contig_3161_1193 1309086 1310825 - M38.UPW
TC A49_contig_3161 A49_contig_3161_1194 1311037 1312431 + 2.A.40.7.6
Gene ID: A49_contig_3161_1187
Type: TC
Location: 1304107 - 1305171 (-)
Gene ID: A49_contig_3161_1188
Type: TC
Location: 1305187 - 1305966 (-)
Gene ID: A49_contig_3161_1189
Type: TC
Location: 1305966 - 1306793 (-)
Gene ID: A49_contig_3161_1190
Type: TC
Location: 1306786 - 1307856 (-)
Gene ID: A49_contig_3161_1191
Type: CAZyme
Location: 1307946 - 1308692 (-)
Gene ID: A49_contig_3161_1192
Type:
Location: 1308831 - 1309073 (-)
Gene ID: A49_contig_3161_1193
Type: peptidase
Location: 1309086 - 1310825 (-)
Gene ID: A49_contig_3161_1194
Type: TC
Location: 1311037 - 1312431 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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