dbCAN Logo

Cluster: A43.bin_3_CGC82

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_185 A43_contig_185_394 464934 466340 + 9.B.18.1.1
TC A43_contig_185 A43_contig_185_395 466399 467214 + 1.B.18.3.3
TC A43_contig_185 A43_contig_185_396 467221 469662 + 8.A.3.3.4
pfam A43_contig_185 A43_contig_185_397 469774 470619 + PS_pyruv_trans
pfam A43_contig_185 A43_contig_185_398 470619 472154 + MatE
CAZyme A43_contig_185 A43_contig_185_399 472247 473026 + GT32
pfam A43_contig_185 A43_contig_185_400 473041 474015 + Acyl_transf_3
CAZyme A43_contig_185 A43_contig_185_401 474022 474990 + GT2
NULL(UNKNOWN) A43_contig_185 A43_contig_185_402 474992 476029 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A43_contig_185 A43_contig_185_403 476073 477203 + Amino_oxidase | GLF | NAD_binding_8
CAZyme A43_contig_185 A43_contig_185_404 477206 478210 + GT113
pfam A43_contig_185 A43_contig_185_405 478269 479462 + Wzy_C
NULL(UNKNOWN) A43_contig_185 A43_contig_185_406 479459 479548 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A43_contig_185 A43_contig_185_407 479635 480693 + GT4
CAZyme A43_contig_185 A43_contig_185_408 480704 481795 + GT4
NULL(UNKNOWN) A43_contig_185 A43_contig_185_409 481807 482373 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A43_contig_185 A43_contig_185_410 482412 483527 + GT4
pfam A43_contig_185 A43_contig_185_411 483520 484089 + Hexapep | Hexapep_2
pfam A43_contig_185 A43_contig_185_412 484098 484577 + Alg14
CAZyme A43_contig_185 A43_contig_185_413 484574 485044 + GT1
CAZyme A43_contig_185 A43_contig_185_414 485075 485830 + GT2
Gene ID: A43_contig_185_394
Type: TC
Location: 464934 - 466340 (+)
Gene ID: A43_contig_185_395
Type: TC
Location: 466399 - 467214 (+)
Gene ID: A43_contig_185_396
Type: TC
Location: 467221 - 469662 (+)
Gene ID: A43_contig_185_397
Type: pfam
Location: 469774 - 470619 (+)
Gene ID: A43_contig_185_398
Type: pfam
Location: 470619 - 472154 (+)
Gene ID: A43_contig_185_399
Type: CAZyme
Location: 472247 - 473026 (+)
Gene ID: A43_contig_185_400
Type: pfam
Location: 473041 - 474015 (+)
Gene ID: A43_contig_185_401
Type: CAZyme
Location: 474022 - 474990 (+)
Gene ID: A43_contig_185_402
Type:
Location: 474992 - 476029 (+)
Gene ID: A43_contig_185_403
Type: pfam
Location: 476073 - 477203 (+)
Gene ID: A43_contig_185_404
Type: CAZyme
Location: 477206 - 478210 (+)
Gene ID: A43_contig_185_405
Type: pfam
Location: 478269 - 479462 (+)
Gene ID: A43_contig_185_406
Type:
Location: 479459 - 479548 (+)
Gene ID: A43_contig_185_407
Type: CAZyme
Location: 479635 - 480693 (+)
Gene ID: A43_contig_185_408
Type: CAZyme
Location: 480704 - 481795 (+)
Gene ID: A43_contig_185_409
Type:
Location: 481807 - 482373 (+)
Gene ID: A43_contig_185_410
Type: CAZyme
Location: 482412 - 483527 (+)
Gene ID: A43_contig_185_411
Type: pfam
Location: 483520 - 484089 (+)
Gene ID: A43_contig_185_412
Type: pfam
Location: 484098 - 484577 (+)
Gene ID: A43_contig_185_413
Type: CAZyme
Location: 484574 - 485044 (+)
Gene ID: A43_contig_185_414
Type: CAZyme
Location: 485075 - 485830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_185_396 vegan > omnivore 1.02812 0.00290
A43_contig_185_400 vegan > omnivore 1.47958 0.00290
A43_contig_185_401 vegan > omnivore 1.12303 0.00290
A43_contig_185_405 vegan > omnivore 1.67736 0.00290
A43_contig_185_406 vegan > omnivore 1.21970 0.00290
A43_contig_185_411 vegan > omnivore 1.45131 0.00290
A43_contig_185_413 vegan > omnivore 1.41876 0.00290
A43_contig_185_413 vegetarian > omnivore 1.40146 0.02617

🧭 Explore Read Mapping of CGC

← Back to Cluster List