PROTEIN: A43_contig_185_402
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Protein File & Metadata
Source:
A43_contig_185_402.pdb
Genome ID:
Protein ID:
A43_contig_185_402
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Protein Sequence
MYQNYKVVVN TAAGRRRYMQ YLVPPILNAD IVDRYDIWVN TRNMVDIEFF KKLAQKYPKV 60 NLVWQPDGVV NGIASINAFY RDCCDKDTIY MKLDDDVVWF EPELFEKMVK FRVDNPEYFL 120 VSPLVINNAL STYLLQVHNK IKLDKYYMSI CGERTICFDG WFAADLHDWF MEKYLIAGKY 180 QELYVGKHPM GMARFSINCV LWFGNEMAEF KGEVPGDDEE FLSCIKPTQL GKANCFNGDA 240 LIAHFAFGPQ REGLDKMDIL NRYGKILHDL WKQDESMREI DISVQQMIKK VEAREAELNS 300 LPSPYKCIPK VKVPFFMRLG KKLPERVRCA IRELQRKQRY KFIER 345
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NZA9-F1-model_v4 | 1 | 282 | 69 | 411 | 0.669 |
0.9031 |
| AF-C0NWW0-F1-model_v4 | 1 | 286 | 79 | 425 | 0.6645 |
0.8876 |
| AF-C1H7H9-F1-model_v4 | 1 | 286 | 93 | 435 | 0.6586 |
0.8885 |
| AF-C1HDV8-F1-model_v4 | 1 | 286 | 71 | 414 | 0.658 |
0.8887 |
| AF-A0A1C1CRS5-F1-model_v4 | 1 | 280 | 115 | 462 | 0.6402 |
0.9043 |
| AF-C1HAE4-F1-model_v4 | 1 | 278 | 82 | 462 | 0.6353 |
0.9044 |
| AF-K0F8C8-F1-model_v4 | 1 | 313 | 4 | 284 | 0.5859 |
0.6634 |
| AF-A0A133CI93-F1-model_v4 | 1 | 313 | 3 | 248 | 0.5821 |
0.7209 |
| AF-Q48215-F1-model_v4 | 5 | 344 | 1 | 267 | 0.5477 |
0.6336 |
| AF-Q0P9A9-F1-model_v4 | 1 | 322 | 1 | 274 | 0.546 |
0.6234 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCM89438.1 | GT2 | 2 | 275 | 1 | 290 | 0.5942 |
0.6995 |
| AF-A0A2P1PVU2-F1-model_v4 | GT2 | 2 | 311 | 2 | 231 | 0.5904 |
0.7869 |
| A0A7D6V9C3 | GT2 | 1 | 313 | 3 | 282 | 0.5843 |
0.661 |
| AF-A0A7D6V9C3-F1-model_v4 | GT2 | 1 | 313 | 3 | 282 | 0.5843 |
0.661 |
| AF-A0A6G9YSQ1-F1-model_v4 | GT2 | 1 | 313 | 4 | 283 | 0.5803 |
0.6577 |
| A0A3E3K4D4 | GT2 | 1 | 333 | 4 | 295 | 0.5783 |
0.6442 |
| UVO98321.1 | GT2 | 2 | 336 | 1 | 290 | 0.5767 |
0.6429 |
| AF-Q5E8H6-F1-model_v4 | GT2 | 1 | 343 | 1 | 270 | 0.5752 |
0.6618 |
| AF-A0A0D3QUI0-F1-model_v4 | GT2 | 1 | 344 | 1 | 270 | 0.5734 |
0.6586 |
| AF-A0A4P6WLT4-F1-model_v4 | GT2 | 1 | 343 | 1 | 270 | 0.5728 |
0.6581 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ULT57322.1 | GT2 | 2 | 345 | 1 | 289 | 0.6116 |
0.6851 |
| A0A8A7K6J3 | GT2 | 6 | 314 | 1 | 236 | 0.5979 |
0.793 |
| BCM89438.1 | GT2 | 2 | 275 | 1 | 290 | 0.5942 |
0.6995 |
| A0A2P1PVU2 | GT2 | 2 | 311 | 2 | 231 | 0.5904 |
0.7869 |
| A0A7D6V9C3 | GT2 | 1 | 313 | 3 | 282 | 0.5843 |
0.661 |
| QRQ97185.1 | GT2 | 2 | 244 | 1 | 228 | 0.5796 |
0.712 |
| A0A3E3K4D4 | GT2 | 1 | 333 | 4 | 295 | 0.5783 |
0.6442 |
| UVO98321.1 | GT2 | 2 | 336 | 1 | 290 | 0.5767 |
0.6429 |
| A0A2V4F1C2 | GT2 | 1 | 345 | 1 | 271 | 0.5754 |
0.6624 |
| A0A2Z4BVV7 | GT2 | 4 | 313 | 1 | 236 | 0.5734 |
0.7135 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3pol-assembly1.cif.gz_A | 1 | 271 | 5 | 262 | 0.5573 |
0.6586 |
| 5tzi-assembly1.cif.gz_C | 5 | 317 | 1 | 258 | 0.4683 |
0.6211 |
| 7sp8-assembly1.cif.gz_A | 1 | 345 | 41 | 485 | 0.4449 |
0.5362 |
| 6teu-assembly1.cif.gz_A | 2 | 293 | 242 | 536 | 0.4052 |
0.6291 |
| 8bz8-assembly2.cif.gz_D | 4 | 345 | 1 | 466 | 0.404 |
0.5233 |
| 6tex-assembly1.cif.gz_A | 2 | 295 | 255 | 548 | 0.4028 |
0.6239 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42216-F1-model_v4 | 3 | 272 | 1 | 246 | 0.5729 |
0.6846 |
| AF-P71054-F1-model_v4 | 1 | 345 | 1 | 272 | 0.5705 |
0.6596 |
| AF-O32268-F1-model_v4 | 1 | 343 | 2 | 252 | 0.5682 |
0.6733 |
| AF-Q46635-F1-model_v4 | 6 | 345 | 1 | 266 | 0.5645 |
0.6534 |
| AF-A0LE62-F1-model_v4 | 5 | 274 | 1 | 250 | 0.5636 |
0.6695 |
| AF-B0KF43-F1-model_v4 | 1 | 266 | 1 | 254 | 0.5601 |
0.6604 |
| AF-Q7UI86-F1-model_v4 | 5 | 269 | 1 | 250 | 0.5588 |
0.6633 |
| AF-B7H3M4-F1-model_v4 | 6 | 278 | 1 | 253 | 0.5588 |
0.6606 |
| AF-Q1ICZ9-F1-model_v4 | 1 | 266 | 1 | 254 | 0.5585 |
0.6589 |
| AF-B0VD12-F1-model_v4 | 6 | 278 | 1 | 253 | 0.5584 |
0.6602 |