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Cluster: A41.CMAG_2_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_3275 3814292 3817399 + 1.B.14.6.1
pfam A41_contig_166 A41_contig_166_3276 3817425 3818927 + SusD_RagB | SusD-like_3
TC A41_contig_166 A41_contig_166_3277 3819011 3819289 + 2.A.124.1.2
TC A41_contig_166 A41_contig_166_3278 3819286 3819888 + 2.A.124.1.2
CAZyme A41_contig_166 A41_contig_166_3279 3819906 3823073 + GH2
CAZyme A41_contig_166 A41_contig_166_3280 3823117 3825036 + GH63
Gene ID: A41_contig_166_3275
Type: TC
Location: 3814292 - 3817399 (+)
Gene ID: A41_contig_166_3276
Type: pfam
Location: 3817425 - 3818927 (+)
Gene ID: A41_contig_166_3277
Type: TC
Location: 3819011 - 3819289 (+)
Gene ID: A41_contig_166_3278
Type: TC
Location: 3819286 - 3819888 (+)
Gene ID: A41_contig_166_3279
Type: CAZyme
Location: 3819906 - 3823073 (+)
Gene ID: A41_contig_166_3280
Type: CAZyme
Location: 3823117 - 3825036 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A41_contig_166_3277 vegetarian > vegan 1.11251 0.01450
A41_contig_166_3278 vegetarian > vegan 1.17259 0.01450

🧭 Explore Read Mapping of CGC

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