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Cluster: A41.CMAG_2_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_3145 3618445 3619638 + 1.A.23.4.5
pfam A41_contig_166 A41_contig_166_3146 3619650 3620036 + 4HBT | FlK
CAZyme A41_contig_166 A41_contig_166_3147 3620340 3621746 - GH140
CAZyme A41_contig_166 A41_contig_166_3148 3621817 3624006 - GH78
CAZyme A41_contig_166 A41_contig_166_3149 3624036 3625418 - GH175
pfam A41_contig_166 A41_contig_166_3150 3625758 3627218 + FGGY_N | FGGY_C
pfam A41_contig_166 A41_contig_166_3151 3627246 3628499 + RhaA
TC A41_contig_166 A41_contig_166_3152 3628593 3629624 + 2.A.7.6.1
Gene ID: A41_contig_166_3145
Type: TC
Location: 3618445 - 3619638 (+)
Gene ID: A41_contig_166_3146
Type: pfam
Location: 3619650 - 3620036 (+)
Gene ID: A41_contig_166_3147
Type: CAZyme
Location: 3620340 - 3621746 (-)
Gene ID: A41_contig_166_3148
Type: CAZyme
Location: 3621817 - 3624006 (-)
Gene ID: A41_contig_166_3149
Type: CAZyme
Location: 3624036 - 3625418 (-)
Gene ID: A41_contig_166_3150
Type: pfam
Location: 3625758 - 3627218 (+)
Gene ID: A41_contig_166_3151
Type: pfam
Location: 3627246 - 3628499 (+)
Gene ID: A41_contig_166_3152
Type: TC
Location: 3628593 - 3629624 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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