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Cluster: A41.CMAG_2_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_14 12699 13889 - 2.A.1.2.97
TF A41_contig_166 A41_contig_166_15 14037 14888 + HTH_AraC
TC A41_contig_166 A41_contig_166_16 14894 16147 - 2.A.1.2.97
TF A41_contig_166 A41_contig_166_17 16299 17144 + HTH_AraC
CAZyme A41_contig_166 A41_contig_166_18 17210 19573 - GH13_10
NULL(UNKNOWN) A41_contig_166 A41_contig_166_19 19643 20344 - NULL(UNKNOWN)
[View Structural Homologs]
TC A41_contig_166 A41_contig_166_20 20372 22015 - 8.A.46.1.1
TC A41_contig_166 A41_contig_166_21 22028 25003 - 1.B.14.6.1
CAZyme A41_contig_166 A41_contig_166_22 25178 27358 - GH97
CAZyme A41_contig_166 A41_contig_166_23 27525 29378 - GH13_46
Gene ID: A41_contig_166_14
Type: TC
Location: 12699 - 13889 (-)
Gene ID: A41_contig_166_15
Type: TF
Location: 14037 - 14888 (+)
Gene ID: A41_contig_166_16
Type: TC
Location: 14894 - 16147 (-)
Gene ID: A41_contig_166_17
Type: TF
Location: 16299 - 17144 (+)
Gene ID: A41_contig_166_18
Type: CAZyme
Location: 17210 - 19573 (-)
Gene ID: A41_contig_166_19
Type:
Location: 19643 - 20344 (-)
Gene ID: A41_contig_166_20
Type: TC
Location: 20372 - 22015 (-)
Gene ID: A41_contig_166_21
Type: TC
Location: 22028 - 25003 (-)
Gene ID: A41_contig_166_22
Type: CAZyme
Location: 25178 - 27358 (-)
Gene ID: A41_contig_166_23
Type: CAZyme
Location: 27525 - 29378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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