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Cluster: A31.bin_18_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A31_contig_5736 A31_contig_5736_45 51294 51812 + 2.A.87.3.2
TC A31_contig_5736 A31_contig_5736_46 51886 53181 + 3.D.6.1.2
TC A31_contig_5736 A31_contig_5736_47 53195 54187 + 3.D.6.1.2
pfam A31_contig_5736 A31_contig_5736_48 54184 55161 + FMN_bind | FMN_bind
TC A31_contig_5736 A31_contig_5736_49 55158 55841 + 3.D.6.1.2
TC A31_contig_5736 A31_contig_5736_50 55841 56461 + 3.D.6.1.2
TC A31_contig_5736 A31_contig_5736_51 56500 57294 + 3.D.6.1.1
pfam A31_contig_5736 A31_contig_5736_52 57575 58123 + Rubrerythrin | RUBY_RBDX
TC A31_contig_5736 A31_contig_5736_53 58492 59892 - 2.A.25.1.9
NULL(UNKNOWN) A31_contig_5736 A31_contig_5736_54 60192 60521 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A31_contig_5736 A31_contig_5736_55 60883 63171 + GT51
Gene ID: A31_contig_5736_45
Type: TC
Location: 51294 - 51812 (+)
Gene ID: A31_contig_5736_46
Type: TC
Location: 51886 - 53181 (+)
Gene ID: A31_contig_5736_47
Type: TC
Location: 53195 - 54187 (+)
Gene ID: A31_contig_5736_48
Type: pfam
Location: 54184 - 55161 (+)
Gene ID: A31_contig_5736_49
Type: TC
Location: 55158 - 55841 (+)
Gene ID: A31_contig_5736_50
Type: TC
Location: 55841 - 56461 (+)
Gene ID: A31_contig_5736_51
Type: TC
Location: 56500 - 57294 (+)
Gene ID: A31_contig_5736_52
Type: pfam
Location: 57575 - 58123 (+)
Gene ID: A31_contig_5736_53
Type: TC
Location: 58492 - 59892 (-)
Gene ID: A31_contig_5736_54
Type:
Location: 60192 - 60521 (-)
Gene ID: A31_contig_5736_55
Type: CAZyme
Location: 60883 - 63171 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A31_contig_5736_50 vegetarian > vegan 1.07318 0.04449

🧭 Explore Read Mapping of CGC

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