Genome Details
Selected Rep_genome_ID: A31.bin_18
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA3818
Species
UBA3818 sp904397845
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A31.bin_18 | 2,525,234 | 99.33% | 0.67% | China(Inner Mongolia) | Asia | IMGG |
| CGMR046778 | 2,012,230 | 96.2% | 0.89% | China | Asia | CGMR |
| HRGMv2_3184 | 1,782,745 | 92.64% | 0% | South Korea | Asia | HRGM |
| REFINED_METABAT215_SUBJECT_CONTIGS_1500_ASSEMBLY_K77_MERGED__Pilot_MoBio_Fiber_C_24_1038.14 | 1,740,823 | 91.5% | 1.01% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A31.bin_18_CGC12 | CGCFAM_00004 | Yes | 9 | 2 | alpha-glucan |
| A31.bin_18_CGC9 | CGCFAM_00008 | Yes | 3 | 1 | |
| A31.bin_18_CGC10 | CGCFAM_00010 | Yes | 6 | 2 | alpha-glucan |
| A31.bin_18_CGC13 | CGCFAM_00038 | Yes | 3 | 1 | |
| A31.bin_18_CGC8 | CGCFAM_00075 | Yes | 4 | 1 | |
| A31.bin_18_CGC5 | CGCFAM_00137 | Yes | 4 | 1 | |
| A31.bin_18_CGC7 | CGCFAM_00196 | Yes | 5 | 1 | |
| A31.bin_18_CGC1 | CGCFAM_00978 | Yes | 4 | 1 | |
| A31.bin_18_CGC3 | CGCFAM_04365 | Yes | 3 | 2 |
Top CAZyme Families