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Cluster: A31.CMAG_2_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A31_contig_998 A31_contig_998_1944 2073091 2074443 + 2.A.66.1.32
pfam A31_contig_998 A31_contig_998_1945 2074440 2074958 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
TC A31_contig_998 A31_contig_998_1946 2075700 2076188 + 4.A.6.1.5
TC A31_contig_998 A31_contig_998_1947 2076190 2076987 + 4.A.6.1.13
TC A31_contig_998 A31_contig_998_1948 2076980 2077786 + 4.A.6.1.13
TC A31_contig_998 A31_contig_998_1949 2077809 2078231 + 4.A.6.1.19
CAZyme A31_contig_998 A31_contig_998_1950 2078224 2079888 + GH13_31
TF A31_contig_998 A31_contig_998_1951 2079881 2080879 + LacI
TC A31_contig_998 A31_contig_998_1952 2081182 2082609 - 2.A.1.3.30
Gene ID: A31_contig_998_1944
Type: TC
Location: 2073091 - 2074443 (+)
Gene ID: A31_contig_998_1945
Type: pfam
Location: 2074440 - 2074958 (+)
Gene ID: A31_contig_998_1946
Type: TC
Location: 2075700 - 2076188 (+)
Gene ID: A31_contig_998_1947
Type: TC
Location: 2076190 - 2076987 (+)
Gene ID: A31_contig_998_1948
Type: TC
Location: 2076980 - 2077786 (+)
Gene ID: A31_contig_998_1949
Type: TC
Location: 2077809 - 2078231 (+)
Gene ID: A31_contig_998_1950
Type: CAZyme
Location: 2078224 - 2079888 (+)
Gene ID: A31_contig_998_1951
Type: TF
Location: 2079881 - 2080879 (+)
Gene ID: A31_contig_998_1952
Type: TC
Location: 2081182 - 2082609 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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