Cluster: A31.CMAG_2_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A31.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A31_contig_998 | A31_contig_998_1485 | 1608035 | 1608850 | + | GT8 |
| NULL(UNKNOWN) | A31_contig_998 | A31_contig_998_1486 | 1608847 | 1609563 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | A31_contig_998 | A31_contig_998_1487 | 1609687 | 1610376 | + | Trans_reg_C |
| TC | A31_contig_998 | A31_contig_998_1488 | 1610391 | 1611569 | + | 2.A.21.9.1 |
| peptidase | A31_contig_998 | A31_contig_998_1489 | 1611663 | 1613009 | + | S11.006 |
| TC | A31_contig_998 | A31_contig_998_1490 | 1614482 | 1617904 | + | 9.B.74.1.3 |
Gene ID: A31_contig_998_1485
Type: CAZyme
Location: 1608035 - 1608850 (+)
Type: CAZyme
Location: 1608035 - 1608850 (+)
Gene ID: A31_contig_998_1486
Type:
Location: 1608847 - 1609563 (+)
Type:
Location: 1608847 - 1609563 (+)
Gene ID: A31_contig_998_1487
Type: TF
Location: 1609687 - 1610376 (+)
Type: TF
Location: 1609687 - 1610376 (+)
Gene ID: A31_contig_998_1488
Type: TC
Location: 1610391 - 1611569 (+)
Type: TC
Location: 1610391 - 1611569 (+)
Gene ID: A31_contig_998_1489
Type: peptidase
Location: 1611663 - 1613009 (+)
Type: peptidase
Location: 1611663 - 1613009 (+)
Gene ID: A31_contig_998_1490
Type: TC
Location: 1614482 - 1617904 (+)
Type: TC
Location: 1614482 - 1617904 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus ruminis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.