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Cluster: A19.CMAG_6_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A19_contig_3938 A19_contig_3938_134 155522 156874 - 2.A.38.4.1
NULL(UNKNOWN) A19_contig_3938 A19_contig_3938_135 156878 159664 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) A19_contig_3938 A19_contig_3938_136 159683 161596 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A19_contig_3938 A19_contig_3938_137 161593 162594 - GT2
pfam A19_contig_3938 A19_contig_3938_138 162658 163605 - Prok-RING_1
TC A19_contig_3938 A19_contig_3938_139 164172 164435 + 8.A.8.1.4
NULL(UNKNOWN) A19_contig_3938 A19_contig_3938_140 164645 165355 + NULL(UNKNOWN)
[View Structural Homologs]
TC A19_contig_3938 A19_contig_3938_141 166500 168242 - 1.A.34.1.1
Gene ID: A19_contig_3938_134
Type: TC
Location: 155522 - 156874 (-)
Gene ID: A19_contig_3938_135
Type:
Location: 156878 - 159664 (-)
Gene ID: A19_contig_3938_136
Type:
Location: 159683 - 161596 (-)
Gene ID: A19_contig_3938_137
Type: CAZyme
Location: 161593 - 162594 (-)
Gene ID: A19_contig_3938_138
Type: pfam
Location: 162658 - 163605 (-)
Gene ID: A19_contig_3938_139
Type: TC
Location: 164172 - 164435 (+)
Gene ID: A19_contig_3938_140
Type:
Location: 164645 - 165355 (+)
Gene ID: A19_contig_3938_141
Type: TC
Location: 166500 - 168242 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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