PROTEIN: A19_contig_3938_140
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Protein File & Metadata
Source:
A19_contig_3938_140.pdb
Genome ID:
Protein ID:
A19_contig_3938_140
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Protein Sequence
MRRAFTAAAA VAGAIMLSGC SAELPDGYRE FTAAREKYET LDSAKVTMTD LDSGEQVMEF 60 SFYISANDEM VLSYTGTWGG VTQQAYSDGA EFFYKESGDD KWTVIGSGDE NYIYNVYNRK 120 YRYPYAEGRM FFLAAEAVKD AAVISSDDGP TMITYTYDPA KLNEASMPGV EEEISAFSAL 180 TTTLTIDGGI PVKFVENGTV TTVSGEELTL NMEIDVTAVN EVFEIPYPVD EVQTSQ 236
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CCP6-F1-model_v4 | 26 | 232 | 40 | 238 | 0.5176 |
0.6334 |
| AF-P9WK45-F1-model_v4 | 26 | 231 | 40 | 236 | 0.5072 |
0.6249 |
| AF-P9WK47-F1-model_v4 | 24 | 230 | 54 | 261 | 0.4987 |
0.612 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1P8WH16-F1-model_v4 | CE12 , GH43_5 , PL22 | 21 | 236 | 29 | 246 | 0.3708 |
0.6795 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1P8WH16 | CE12 , GH43_5 , PL22 | 21 | 236 | 29 | 246 | 0.3708 |
0.6795 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P41109-F1-model_v4 | 25 | 236 | 37 | 276 | 0.5553 |
0.6868 |
| AF-Q9CCP6-F1-model_v4 | 26 | 232 | 40 | 238 | 0.5176 |
0.6334 |
| AF-A0QWU8-F1-model_v4 | 25 | 231 | 38 | 236 | 0.5081 |
0.6194 |
| AF-P9WK44-F1-model_v4 | 26 | 231 | 40 | 236 | 0.5073 |
0.626 |
| AF-P9WK45-F1-model_v4 | 26 | 231 | 40 | 236 | 0.5072 |
0.6249 |
| AF-A5U2B3-F1-model_v4 | 26 | 231 | 40 | 236 | 0.5071 |
0.6236 |
| AF-P0A5I9-F1-model_v4 | 26 | 231 | 40 | 236 | 0.507 |
0.6237 |
| AF-A0A0H3M3S8-F1-model_v4 | 26 | 231 | 40 | 236 | 0.5068 |
0.6246 |
| AF-P65315-F1-model_v4 | 23 | 230 | 54 | 261 | 0.5009 |
0.6115 |
| AF-P9WK47-F1-model_v4 | 24 | 230 | 54 | 261 | 0.4987 |
0.612 |