Cluster: A15.CMAG_2_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A15_contig_688 | A15_contig_688_253 | 265065 | 267716 | + | GH13_31 |
| TC | A15_contig_688 | A15_contig_688_254 | 267744 | 269762 | - | 3.A.1.134.4 |
| TC | A15_contig_688 | A15_contig_688_255 | 269752 | 270522 | - | 3.A.1.134.4 |
Gene ID: A15_contig_688_253
Type: CAZyme
Location: 265065 - 267716 (+)
Type: CAZyme
Location: 265065 - 267716 (+)
Gene ID: A15_contig_688_254
Type: TC
Location: 267744 - 269762 (-)
Type: TC
Location: 267744 - 269762 (-)
Gene ID: A15_contig_688_255
Type: TC
Location: 269752 - 270522 (-)
Type: TC
Location: 269752 - 270522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_688_253 | vegan > omnivore | 1.48647 | 0.04731 |