Cluster: A15.CMAG_2_CGC43
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_688 | A15_contig_688_3460 | 3639371 | 3640267 | - | 3.A.1.1.20 |
| TC | A15_contig_688 | A15_contig_688_3461 | 3640264 | 3641178 | - | 3.A.1.1.20 |
| pfam | A15_contig_688 | A15_contig_688_3462 | 3641165 | 3643597 | - | SBBP |
| CAZyme | A15_contig_688 | A15_contig_688_3463 | 3643774 | 3644886 | - | GH53 |
| CAZyme | A15_contig_688 | A15_contig_688_3464 | 3644962 | 3648111 | - | GH2 |
Gene ID: A15_contig_688_3460
Type: TC
Location: 3639371 - 3640267 (-)
Type: TC
Location: 3639371 - 3640267 (-)
Gene ID: A15_contig_688_3461
Type: TC
Location: 3640264 - 3641178 (-)
Type: TC
Location: 3640264 - 3641178 (-)
Gene ID: A15_contig_688_3462
Type: pfam
Location: 3641165 - 3643597 (-)
Type: pfam
Location: 3641165 - 3643597 (-)
Gene ID: A15_contig_688_3463
Type: CAZyme
Location: 3643774 - 3644886 (-)
Type: CAZyme
Location: 3643774 - 3644886 (-)
Gene ID: A15_contig_688_3464
Type: CAZyme
Location: 3644962 - 3648111 (-)
Type: CAZyme
Location: 3644962 - 3648111 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_688_3463 | vegetarian > omnivore | 2.91738 | 0.00079 |