Cluster: A15.CMAG_2_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A15_contig_688 | A15_contig_688_2278 | 2399225 | 2401663 | + | GH2 |
| pfam | A15_contig_688 | A15_contig_688_2279 | 2401684 | 2403192 | + | DUF6937 | DUF6938 |
| TC | A15_contig_688 | A15_contig_688_2280 | 2403227 | 2404639 | + | 2.A.2.1.1 |
| CAZyme | A15_contig_688 | A15_contig_688_2281 | 2404654 | 2407065 | + | GH36 |
Gene ID: A15_contig_688_2278
Type: CAZyme
Location: 2399225 - 2401663 (+)
Type: CAZyme
Location: 2399225 - 2401663 (+)
Gene ID: A15_contig_688_2279
Type: pfam
Location: 2401684 - 2403192 (+)
Type: pfam
Location: 2401684 - 2403192 (+)
Gene ID: A15_contig_688_2280
Type: TC
Location: 2403227 - 2404639 (+)
Type: TC
Location: 2403227 - 2404639 (+)
Gene ID: A15_contig_688_2281
Type: CAZyme
Location: 2404654 - 2407065 (+)
Type: CAZyme
Location: 2404654 - 2407065 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia inulinivorans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.