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Cluster: A15.CMAG_2_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_688 A15_contig_688_988 1019554 1021137 + 3.A.1.5.28
TC A15_contig_688 A15_contig_688_989 1021173 1023113 + 3.A.1.5.26
TC A15_contig_688 A15_contig_688_990 1023106 1024077 + 3.A.1.5.20
TC A15_contig_688 A15_contig_688_991 1024094 1024978 + 3.A.1.5.2
pfam A15_contig_688 A15_contig_688_992 1025117 1025854 + PNP_UDP_1
TC A15_contig_688 A15_contig_688_993 1025868 1026470 + 3.A.1.28.1
pfam A15_contig_688 A15_contig_688_994 1026504 1027271 + CbiQ
TC A15_contig_688 A15_contig_688_995 1027297 1029036 + 3.A.1.33.1
pfam A15_contig_688 A15_contig_688_996 1029144 1029665 + Isochorismatase
TC A15_contig_688 A15_contig_688_997 1029800 1031254 + 2.A.2.1.1
pfam A15_contig_688 A15_contig_688_998 1031257 1033962 + Trehalase | Glyco_hydro_63 | MGH1-like_GH
TF A15_contig_688 A15_contig_688_999 1033997 1034812 + HTH_AraC | HTH_AraC
CAZyme A15_contig_688 A15_contig_688_1000 1034832 1037096 + GH2
Gene ID: A15_contig_688_988
Type: TC
Location: 1019554 - 1021137 (+)
Gene ID: A15_contig_688_989
Type: TC
Location: 1021173 - 1023113 (+)
Gene ID: A15_contig_688_990
Type: TC
Location: 1023106 - 1024077 (+)
Gene ID: A15_contig_688_991
Type: TC
Location: 1024094 - 1024978 (+)
Gene ID: A15_contig_688_992
Type: pfam
Location: 1025117 - 1025854 (+)
Gene ID: A15_contig_688_993
Type: TC
Location: 1025868 - 1026470 (+)
Gene ID: A15_contig_688_994
Type: pfam
Location: 1026504 - 1027271 (+)
Gene ID: A15_contig_688_995
Type: TC
Location: 1027297 - 1029036 (+)
Gene ID: A15_contig_688_996
Type: pfam
Location: 1029144 - 1029665 (+)
Gene ID: A15_contig_688_997
Type: TC
Location: 1029800 - 1031254 (+)
Gene ID: A15_contig_688_998
Type: pfam
Location: 1031257 - 1033962 (+)
Gene ID: A15_contig_688_999
Type: TF
Location: 1033997 - 1034812 (+)
Gene ID: A15_contig_688_1000
Type: CAZyme
Location: 1034832 - 1037096 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_688_990 vegetarian > omnivore 1.14293 0.00079
A15_contig_688_992 vegetarian > vegan 1.03700 0.00181
A15_contig_688_997 vegetarian > vegan 1.34951 0.00181
A15_contig_688_998 vegetarian > vegan 1.23865 0.00181
A15_contig_688_1000 vegetarian > vegan 1.46904 0.00181

🧭 Explore Read Mapping of CGC

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