Cluster: A129.bin_3_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_04286
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_923 | 921186 | 922652 | - | GH1 |
| TF | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_924 | 922752 | 923630 | - | HTH_1 |
| NULL(UNKNOWN) | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_925 | 923828 | 924058 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_926 | 924072 | 924881 | + | 8.A.5.1.4 |
Gene ID: A129_contig_815_corr_2_np12_923
Type: CAZyme
Location: 921186 - 922652 (-)
Type: CAZyme
Location: 921186 - 922652 (-)
Gene ID: A129_contig_815_corr_2_np12_924
Type: TF
Location: 922752 - 923630 (-)
Type: TF
Location: 922752 - 923630 (-)
Gene ID: A129_contig_815_corr_2_np12_925
Type:
Location: 923828 - 924058 (+)
Type:
Location: 923828 - 924058 (+)
Gene ID: A129_contig_815_corr_2_np12_926
Type: TC
Location: 924072 - 924881 (+)
Type: TC
Location: 924072 - 924881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.