dbCAN HGM

Cluster: A129.bin_3_CGC62

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3565	3632724	3634499	+	CE1
TF	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3566	3634578	3635372	+	HTH_6
pfam	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3567	3635786	3636628	+	PRD \| PRD \| CAT_RBD
TC	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3568	3636716	3638566	+	4.A.1.2.11
pfam	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3569	3638579	3639403	+	PHP
pfam	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3570	3639405	3640163	+	Y_phosphatase3
TC	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3571	3640176	3640850	+	9.B.20.1.4
TC	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3572	3641245	3642546	+	4.A.3.2.7
CAZyme	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3573	3642561	3644045	+	GH1

Gene ID: A129_contig_815_corr_2_np12_3565
Type: CAZyme
Location: 3632724 - 3634499 (+)

Gene ID: A129_contig_815_corr_2_np12_3566
Type: TF
Location: 3634578 - 3635372 (+)

Gene ID: A129_contig_815_corr_2_np12_3567
Type: pfam
Location: 3635786 - 3636628 (+)

Gene ID: A129_contig_815_corr_2_np12_3568
Type: TC
Location: 3636716 - 3638566 (+)

Gene ID: A129_contig_815_corr_2_np12_3569
Type: pfam
Location: 3638579 - 3639403 (+)

Gene ID: A129_contig_815_corr_2_np12_3570
Type: pfam
Location: 3639405 - 3640163 (+)

Gene ID: A129_contig_815_corr_2_np12_3571
Type: TC
Location: 3640176 - 3640850 (+)

Gene ID: A129_contig_815_corr_2_np12_3572
Type: TC
Location: 3641245 - 3642546 (+)

Gene ID: A129_contig_815_corr_2_np12_3573
Type: CAZyme
Location: 3642561 - 3644045 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.