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Cluster: A129.bin_3_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3522 3586203 3588047 + 4.A.1.2.11
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3523 3588058 3589458 + GH1
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3524 3589813 3590220 + 4.A.6.1.19
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3525 3590232 3590693 + 4.A.6.1.19
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3526 3590705 3591469 + 4.A.6.1.19
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3527 3591459 3592262 + 4.A.6.1.19
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3528 3592281 3594968 + PRD | EIIA-man | Sigma54_activ_2
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3529 3594992 3595819 + CE1
Gene ID: A129_contig_815_corr_2_np12_3522
Type: TC
Location: 3586203 - 3588047 (+)
Gene ID: A129_contig_815_corr_2_np12_3523
Type: CAZyme
Location: 3588058 - 3589458 (+)
Gene ID: A129_contig_815_corr_2_np12_3524
Type: TC
Location: 3589813 - 3590220 (+)
Gene ID: A129_contig_815_corr_2_np12_3525
Type: TC
Location: 3590232 - 3590693 (+)
Gene ID: A129_contig_815_corr_2_np12_3526
Type: TC
Location: 3590705 - 3591469 (+)
Gene ID: A129_contig_815_corr_2_np12_3527
Type: TC
Location: 3591459 - 3592262 (+)
Gene ID: A129_contig_815_corr_2_np12_3528
Type: pfam
Location: 3592281 - 3594968 (+)
Gene ID: A129_contig_815_corr_2_np12_3529
Type: CAZyme
Location: 3594992 - 3595819 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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