dbCAN Logo

Cluster: A129.bin_3_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3419 3470156 3475312 + CBM32 | GH84
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3420 3475443 3475925 - 4.A.1.1.1
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3421 3476387 3477847 + 4.A.1.1.2
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3422 3477867 3478697 + PRD | PRD | CAT_RBD
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3423 3478885 3484566 + GH84
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3424 3484745 3485290 + Rubrerythrin | RUBY_RBDX
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3425 3485465 3488032 + 3.A.9.1.2
Gene ID: A129_contig_815_corr_2_np12_3419
Type: CAZyme
Location: 3470156 - 3475312 (+)
Gene ID: A129_contig_815_corr_2_np12_3420
Type: TC
Location: 3475443 - 3475925 (-)
Gene ID: A129_contig_815_corr_2_np12_3421
Type: TC
Location: 3476387 - 3477847 (+)
Gene ID: A129_contig_815_corr_2_np12_3422
Type: pfam
Location: 3477867 - 3478697 (+)
Gene ID: A129_contig_815_corr_2_np12_3423
Type: CAZyme
Location: 3478885 - 3484566 (+)
Gene ID: A129_contig_815_corr_2_np12_3424
Type: pfam
Location: 3484745 - 3485290 (+)
Gene ID: A129_contig_815_corr_2_np12_3425
Type: TC
Location: 3485465 - 3488032 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List