dbCAN HGM

Cluster: A129.bin_3_CGC57

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3336	3383953	3385377	+	CE4
pfam	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3337	3385539	3386366	+	PRD \| PRD \| CAT_RBD
TC	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3338	3386458	3388290	+	4.A.1.2.2
CAZyme	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3339	3388332	3389774	+	GH1
CAZyme	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3340	3389816	3390619	-	CE4
pfam	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3341	3390727	3391914	-	LacY_symp \| Nuc_H_symport \| MFS_1 \| MFS_1 \| MFS_1_like
pfam	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3342	3392062	3392826	+	YdjC
TC	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3343	3393190	3394572	+	2.A.66.1.37
TC	A129_contig_815_corr_2_np12	A129_contig_815_corr_2_np12_3344	3394603	3395127	-	3.A.1.25.2

Gene ID: A129_contig_815_corr_2_np12_3336
Type: CAZyme
Location: 3383953 - 3385377 (+)

Gene ID: A129_contig_815_corr_2_np12_3337
Type: pfam
Location: 3385539 - 3386366 (+)

Gene ID: A129_contig_815_corr_2_np12_3338
Type: TC
Location: 3386458 - 3388290 (+)

Gene ID: A129_contig_815_corr_2_np12_3339
Type: CAZyme
Location: 3388332 - 3389774 (+)

Gene ID: A129_contig_815_corr_2_np12_3340
Type: CAZyme
Location: 3389816 - 3390619 (-)

Gene ID: A129_contig_815_corr_2_np12_3341
Type: pfam
Location: 3390727 - 3391914 (-)

Gene ID: A129_contig_815_corr_2_np12_3342
Type: pfam
Location: 3392062 - 3392826 (+)

Gene ID: A129_contig_815_corr_2_np12_3343
Type: TC
Location: 3393190 - 3394572 (+)

Gene ID: A129_contig_815_corr_2_np12_3344
Type: TC
Location: 3394603 - 3395127 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.