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Cluster: A129.bin_3_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3304 3348803 3349696 + 3.A.1.126.1
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3305 3349686 3350486 + ABC2_membrane_2
TF A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3306 3350588 3351397 + HTH_6
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3307 3351451 3352902 - CE1
STP A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3308 3353114 3354952 + EAL | GGDEF
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3309 3355143 3356477 + FtsX
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_3310 3356449 3357831 + 3.A.1.134.12
Gene ID: A129_contig_815_corr_2_np12_3304
Type: TC
Location: 3348803 - 3349696 (+)
Gene ID: A129_contig_815_corr_2_np12_3305
Type: pfam
Location: 3349686 - 3350486 (+)
Gene ID: A129_contig_815_corr_2_np12_3306
Type: TF
Location: 3350588 - 3351397 (+)
Gene ID: A129_contig_815_corr_2_np12_3307
Type: CAZyme
Location: 3351451 - 3352902 (-)
Gene ID: A129_contig_815_corr_2_np12_3308
Type: STP
Location: 3353114 - 3354952 (+)
Gene ID: A129_contig_815_corr_2_np12_3309
Type: pfam
Location: 3355143 - 3356477 (+)
Gene ID: A129_contig_815_corr_2_np12_3310
Type: TC
Location: 3356449 - 3357831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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