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Cluster: A129.bin_3_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2532 2557542 2558015 - 3.A.7.19.1
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2533 2558031 2558312 - Ribosomal_S6
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2534 2558448 2559833 - GH3
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2535 2559834 2560469 - IspD | NTP_transf_3
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2536 2560629 2561543 + 2.A.58.2.2
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2537 2561515 2562093 + VTT_dom
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2538 2562090 2564087 - 3.A.9.1.2
Gene ID: A129_contig_815_corr_2_np12_2532
Type: TC
Location: 2557542 - 2558015 (-)
Gene ID: A129_contig_815_corr_2_np12_2533
Type: pfam
Location: 2558031 - 2558312 (-)
Gene ID: A129_contig_815_corr_2_np12_2534
Type: CAZyme
Location: 2558448 - 2559833 (-)
Gene ID: A129_contig_815_corr_2_np12_2535
Type: pfam
Location: 2559834 - 2560469 (-)
Gene ID: A129_contig_815_corr_2_np12_2536
Type: TC
Location: 2560629 - 2561543 (+)
Gene ID: A129_contig_815_corr_2_np12_2537
Type: pfam
Location: 2561515 - 2562093 (+)
Gene ID: A129_contig_815_corr_2_np12_2538
Type: TC
Location: 2562090 - 2564087 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A129_contig_815_corr_2_np12_2533 vegan > omnivore 1.35595 0.00565

🧭 Explore Read Mapping of CGC

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