Cluster: A129.bin_3_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A129.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2082 | 2077146 | 2079137 | - | GH128 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2083 | 2079150 | 2083541 | - | GH55_1 |
| TF | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2084 | 2083827 | 2084594 | - | HTH_6 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2085 | 2084698 | 2085693 | - | 9.A.23.1.1 |
Gene ID: A129_contig_815_corr_2_np12_2082
Type: CAZyme
Location: 2077146 - 2079137 (-)
Type: CAZyme
Location: 2077146 - 2079137 (-)
Gene ID: A129_contig_815_corr_2_np12_2083
Type: CAZyme
Location: 2079150 - 2083541 (-)
Type: CAZyme
Location: 2079150 - 2083541 (-)
Gene ID: A129_contig_815_corr_2_np12_2084
Type: TF
Location: 2083827 - 2084594 (-)
Type: TF
Location: 2083827 - 2084594 (-)
Gene ID: A129_contig_815_corr_2_np12_2085
Type: TC
Location: 2084698 - 2085693 (-)
Type: TC
Location: 2084698 - 2085693 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.