Cluster: A129.bin_3_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_06607
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_466 | 461797 | 462246 | + | 4.A.2.1.21 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_467 | 462247 | 462558 | + | 4.A.2.1.22 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_468 | 462661 | 463758 | + | 4.A.2.1.4 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_469 | 463804 | 466524 | + | GH38 |
Gene ID: A129_contig_815_corr_2_np12_466
Type: TC
Location: 461797 - 462246 (+)
Type: TC
Location: 461797 - 462246 (+)
Gene ID: A129_contig_815_corr_2_np12_467
Type: TC
Location: 462247 - 462558 (+)
Type: TC
Location: 462247 - 462558 (+)
Gene ID: A129_contig_815_corr_2_np12_468
Type: TC
Location: 462661 - 463758 (+)
Type: TC
Location: 462661 - 463758 (+)
Gene ID: A129_contig_815_corr_2_np12_469
Type: CAZyme
Location: 463804 - 466524 (+)
Type: CAZyme
Location: 463804 - 466524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.