dbCAN Logo

Cluster: A129.bin_3_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1836 1815213 1820480 - CBM32 | GH173
TF A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1837 1820863 1821729 + HTH_6
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1838 1821768 1826636 - GH173
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1839 1826824 1829538 - CBM4 | CBM4 | GH173
NULL(UNKNOWN) A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1840 1829677 1829853 - NULL(UNKNOWN)
[View Structural Homologs]
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1841 1830022 1831011 - 9.B.157.1.1
Gene ID: A129_contig_815_corr_2_np12_1836
Type: CAZyme
Location: 1815213 - 1820480 (-)
Gene ID: A129_contig_815_corr_2_np12_1837
Type: TF
Location: 1820863 - 1821729 (+)
Gene ID: A129_contig_815_corr_2_np12_1838
Type: CAZyme
Location: 1821768 - 1826636 (-)
Gene ID: A129_contig_815_corr_2_np12_1839
Type: CAZyme
Location: 1826824 - 1829538 (-)
Gene ID: A129_contig_815_corr_2_np12_1840
Type:
Location: 1829677 - 1829853 (-)
Gene ID: A129_contig_815_corr_2_np12_1841
Type: TC
Location: 1830022 - 1831011 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List