Cluster: A129.bin_3_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A129.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1285 | 1272551 | 1273627 | - | GT28 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1286 | 1273656 | 1274732 | - | 2.A.103.1.3 |
| pfam | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1287 | 1274809 | 1276188 | - | Rotamase_2 | Rotamase_3 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1288 | 1276251 | 1278944 | - | GH3 |
Gene ID: A129_contig_815_corr_2_np12_1285
Type: CAZyme
Location: 1272551 - 1273627 (-)
Type: CAZyme
Location: 1272551 - 1273627 (-)
Gene ID: A129_contig_815_corr_2_np12_1286
Type: TC
Location: 1273656 - 1274732 (-)
Type: TC
Location: 1273656 - 1274732 (-)
Gene ID: A129_contig_815_corr_2_np12_1287
Type: pfam
Location: 1274809 - 1276188 (-)
Type: pfam
Location: 1274809 - 1276188 (-)
Gene ID: A129_contig_815_corr_2_np12_1288
Type: CAZyme
Location: 1276251 - 1278944 (-)
Type: CAZyme
Location: 1276251 - 1278944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.