Cluster: A129.bin_3_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1029 | 1032132 | 1032836 | - | 3.A.1.147.2 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1030 | 1032990 | 1034306 | - | GH4 |
| sulfatase | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1031 | 1034293 | 1035042 | - | S1_9 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1032 | 1035052 | 1036368 | - | 4.A.3.2.8 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1033 | 1036475 | 1037125 | - | 4.A.3.2.8 |
Gene ID: A129_contig_815_corr_2_np12_1029
Type: TC
Location: 1032132 - 1032836 (-)
Type: TC
Location: 1032132 - 1032836 (-)
Gene ID: A129_contig_815_corr_2_np12_1030
Type: CAZyme
Location: 1032990 - 1034306 (-)
Type: CAZyme
Location: 1032990 - 1034306 (-)
Gene ID: A129_contig_815_corr_2_np12_1031
Type: sulfatase
Location: 1034293 - 1035042 (-)
Type: sulfatase
Location: 1034293 - 1035042 (-)
Gene ID: A129_contig_815_corr_2_np12_1032
Type: TC
Location: 1035052 - 1036368 (-)
Type: TC
Location: 1035052 - 1036368 (-)
Gene ID: A129_contig_815_corr_2_np12_1033
Type: TC
Location: 1036475 - 1037125 (-)
Type: TC
Location: 1036475 - 1037125 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.