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Cluster: A129.bin_3_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1020 1018982 1020442 - GH1
TF A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1021 1020519 1021712 + HTH_AraC | HTH_AraC
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1022 1021724 1022608 - ROK
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1023 1022605 1024017 - GH1
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1024 1024010 1025299 - 4.A.3.2.2
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1025 1025482 1028559 - 3.A.1.122.13
Gene ID: A129_contig_815_corr_2_np12_1020
Type: CAZyme
Location: 1018982 - 1020442 (-)
Gene ID: A129_contig_815_corr_2_np12_1021
Type: TF
Location: 1020519 - 1021712 (+)
Gene ID: A129_contig_815_corr_2_np12_1022
Type: pfam
Location: 1021724 - 1022608 (-)
Gene ID: A129_contig_815_corr_2_np12_1023
Type: CAZyme
Location: 1022605 - 1024017 (-)
Gene ID: A129_contig_815_corr_2_np12_1024
Type: TC
Location: 1024010 - 1025299 (-)
Gene ID: A129_contig_815_corr_2_np12_1025
Type: TC
Location: 1025482 - 1028559 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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