Cluster: A129.bin_2_CGC17
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_967 | 1106399 | 1107220 | - | 4.A.6.1.19 |
| TC | A129_contig_223 | A129_contig_223_968 | 1107213 | 1108007 | - | 4.A.6.1.22 |
| TC | A129_contig_223 | A129_contig_223_969 | 1108004 | 1108495 | - | 4.A.6.1.16 |
| pfam | A129_contig_223 | A129_contig_223_970 | 1108489 | 1108923 | - | EIIA-man |
| TC | A129_contig_223 | A129_contig_223_971 | 1109076 | 1111898 | - | 3.A.23.1.1 |
| pfam | A129_contig_223 | A129_contig_223_972 | 1112190 | 1113701 | - | IMPDH | CBS | FMN_dh |
| CAZyme | A129_contig_223 | A129_contig_223_973 | 1113954 | 1115393 | - | GT5 |
| pfam | A129_contig_223 | A129_contig_223_974 | 1115393 | 1116508 | - | NTP_transferase | Hexapep_GlmU |
| pfam | A129_contig_223 | A129_contig_223_975 | 1116510 | 1117646 | - | NTP_transferase | Hexapep_GlmU |
| TC | A129_contig_223 | A129_contig_223_976 | 1117940 | 1118695 | - | 3.A.1.34.1 |
| TC | A129_contig_223 | A129_contig_223_977 | 1118679 | 1119563 | - | 3.A.1.34.1 |
| TC | A129_contig_223 | A129_contig_223_978 | 1119589 | 1120578 | - | 3.A.1.34.1 |
Gene ID: A129_contig_223_967
Type: TC
Location: 1106399 - 1107220 (-)
Type: TC
Location: 1106399 - 1107220 (-)
Gene ID: A129_contig_223_968
Type: TC
Location: 1107213 - 1108007 (-)
Type: TC
Location: 1107213 - 1108007 (-)
Gene ID: A129_contig_223_969
Type: TC
Location: 1108004 - 1108495 (-)
Type: TC
Location: 1108004 - 1108495 (-)
Gene ID: A129_contig_223_970
Type: pfam
Location: 1108489 - 1108923 (-)
Type: pfam
Location: 1108489 - 1108923 (-)
Gene ID: A129_contig_223_971
Type: TC
Location: 1109076 - 1111898 (-)
Type: TC
Location: 1109076 - 1111898 (-)
Gene ID: A129_contig_223_972
Type: pfam
Location: 1112190 - 1113701 (-)
Type: pfam
Location: 1112190 - 1113701 (-)
Gene ID: A129_contig_223_973
Type: CAZyme
Location: 1113954 - 1115393 (-)
Type: CAZyme
Location: 1113954 - 1115393 (-)
Gene ID: A129_contig_223_974
Type: pfam
Location: 1115393 - 1116508 (-)
Type: pfam
Location: 1115393 - 1116508 (-)
Gene ID: A129_contig_223_975
Type: pfam
Location: 1116510 - 1117646 (-)
Type: pfam
Location: 1116510 - 1117646 (-)
Gene ID: A129_contig_223_976
Type: TC
Location: 1117940 - 1118695 (-)
Type: TC
Location: 1117940 - 1118695 (-)
Gene ID: A129_contig_223_977
Type: TC
Location: 1118679 - 1119563 (-)
Type: TC
Location: 1118679 - 1119563 (-)
Gene ID: A129_contig_223_978
Type: TC
Location: 1119589 - 1120578 (-)
Type: TC
Location: 1119589 - 1120578 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.