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Cluster: A129.bin_2_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A129_contig_223 A129_contig_223_703 821239 822324 - GH170
pfam A129_contig_223 A129_contig_223_704 822350 822829 - DUF3284
CAZyme A129_contig_223 A129_contig_223_705 822897 824276 - GH1
NULL(UNKNOWN) A129_contig_223 A129_contig_223_706 824270 824452 - NULL(UNKNOWN)
[View Structural Homologs]
TC A129_contig_223 A129_contig_223_707 824495 824809 - 4.A.3.1.2
TC A129_contig_223 A129_contig_223_708 824873 826297 - 4.A.3.2.4
TC A129_contig_223 A129_contig_223_709 826369 826671 - 4.A.3.2.9
CAZyme A129_contig_223 A129_contig_223_710 826988 828313 + GH4
TF A129_contig_223 A129_contig_223_711 828445 829272 + HTH_AraC | HTH_AraC
TC A129_contig_223 A129_contig_223_712 829262 830209 + 2.A.7.3.36
Gene ID: A129_contig_223_703
Type: CAZyme
Location: 821239 - 822324 (-)
Gene ID: A129_contig_223_704
Type: pfam
Location: 822350 - 822829 (-)
Gene ID: A129_contig_223_705
Type: CAZyme
Location: 822897 - 824276 (-)
Gene ID: A129_contig_223_706
Type:
Location: 824270 - 824452 (-)
Gene ID: A129_contig_223_707
Type: TC
Location: 824495 - 824809 (-)
Gene ID: A129_contig_223_708
Type: TC
Location: 824873 - 826297 (-)
Gene ID: A129_contig_223_709
Type: TC
Location: 826369 - 826671 (-)
Gene ID: A129_contig_223_710
Type: CAZyme
Location: 826988 - 828313 (+)
Gene ID: A129_contig_223_711
Type: TF
Location: 828445 - 829272 (+)
Gene ID: A129_contig_223_712
Type: TC
Location: 829262 - 830209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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