Cluster: A129.bin_1_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- CGC Family ID: CGCFAM_02348
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_166 | 161814 | 164384 | - | 3.A.1.122.13 |
| NULL(UNKNOWN) | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_167 | 164505 | 164822 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_168 | 165032 | 165478 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_169 | 165545 | 172387 | - | CBM32 | GH31_18 |
Gene ID: A129_contig_32_corr_1_np12_166
Type: TC
Location: 161814 - 164384 (-)
Type: TC
Location: 161814 - 164384 (-)
Gene ID: A129_contig_32_corr_1_np12_167
Type:
Location: 164505 - 164822 (-)
Type:
Location: 164505 - 164822 (-)
Gene ID: A129_contig_32_corr_1_np12_168
Type:
Location: 165032 - 165478 (-)
Type:
Location: 165032 - 165478 (-)
Gene ID: A129_contig_32_corr_1_np12_169
Type: CAZyme
Location: 165545 - 172387 (-)
Type: CAZyme
Location: 165545 - 172387 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.