Cluster: A129.bin_1_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- CGC Family ID: CGCFAM_03021
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_21 | 14659 | 15363 | - | 3.A.1.124.2 |
| pfam | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_22 | 15612 | 16523 | - | TpcC |
| CAZyme | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_23 | 16541 | 17551 | - | GH23 |
Gene ID: A129_contig_32_corr_1_np12_21
Type: TC
Location: 14659 - 15363 (-)
Type: TC
Location: 14659 - 15363 (-)
Gene ID: A129_contig_32_corr_1_np12_22
Type: pfam
Location: 15612 - 16523 (-)
Type: pfam
Location: 15612 - 16523 (-)
Gene ID: A129_contig_32_corr_1_np12_23
Type: CAZyme
Location: 16541 - 17551 (-)
Type: CAZyme
Location: 16541 - 17551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.