Cluster: A129.bin_1_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- CGC Family ID: CGCFAM_03020
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_246 | A129_contig_246_698 | 647977 | 648669 | - | GT51 |
| pfam | A129_contig_246 | A129_contig_246_699 | 648770 | 648985 | - | UPF0154 |
| NULL(UNKNOWN) | A129_contig_246 | A129_contig_246_700 | 649067 | 649393 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A129_contig_246 | A129_contig_246_701 | 649438 | 650310 | - | 2.A.7.3.47 |
Gene ID: A129_contig_246_698
Type: CAZyme
Location: 647977 - 648669 (-)
Type: CAZyme
Location: 647977 - 648669 (-)
Gene ID: A129_contig_246_699
Type: pfam
Location: 648770 - 648985 (-)
Type: pfam
Location: 648770 - 648985 (-)
Gene ID: A129_contig_246_700
Type:
Location: 649067 - 649393 (-)
Type:
Location: 649067 - 649393 (-)
Gene ID: A129_contig_246_701
Type: TC
Location: 649438 - 650310 (-)
Type: TC
Location: 649438 - 650310 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.