Cluster: A129.bin_1_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- CGC Family ID: CGCFAM_06601
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1530 | 1592307 | 1594166 | - | GH129 |
| pfam | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1531 | 1594290 | 1595159 | + | S6PP | Hydrolase_3 |
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1532 | 1595235 | 1596524 | + | 9.A.40.2.1 |
Gene ID: A129_contig_32_corr_1_np12_1530
Type: CAZyme
Location: 1592307 - 1594166 (-)
Type: CAZyme
Location: 1592307 - 1594166 (-)
Gene ID: A129_contig_32_corr_1_np12_1531
Type: pfam
Location: 1594290 - 1595159 (+)
Type: pfam
Location: 1594290 - 1595159 (+)
Gene ID: A129_contig_32_corr_1_np12_1532
Type: TC
Location: 1595235 - 1596524 (+)
Type: TC
Location: 1595235 - 1596524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.