Cluster: A129.bin_1_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: A129.bin_1
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1153 | 1230115 | 1231533 | + | GH1 |
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1154 | 1231547 | 1232869 | + | 4.A.3.2.9 |
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1155 | 1232875 | 1233177 | + | 4.A.3.2.9 |
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_1156 | 1233181 | 1233483 | + | 4.A.3.2.2 |
Gene ID: A129_contig_32_corr_1_np12_1153
Type: CAZyme
Location: 1230115 - 1231533 (+)
Type: CAZyme
Location: 1230115 - 1231533 (+)
Gene ID: A129_contig_32_corr_1_np12_1154
Type: TC
Location: 1231547 - 1232869 (+)
Type: TC
Location: 1231547 - 1232869 (+)
Gene ID: A129_contig_32_corr_1_np12_1155
Type: TC
Location: 1232875 - 1233177 (+)
Type: TC
Location: 1232875 - 1233177 (+)
Gene ID: A129_contig_32_corr_1_np12_1156
Type: TC
Location: 1233181 - 1233483 (+)
Type: TC
Location: 1233181 - 1233483 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.