Cluster: A129.bin_1_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- CGC Family ID: CGCFAM_06600
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_246 | A129_contig_246_26 | 24895 | 25620 | - | 3.A.1.147.6 |
| TC | A129_contig_246 | A129_contig_246_27 | 25617 | 26276 | - | 9.A.32.1.1 |
| TF | A129_contig_246 | A129_contig_246_28 | 26273 | 26542 | - | HTH_5 |
| peptidase | A129_contig_246 | A129_contig_246_29 | 26677 | 27459 | + | C60.002 |
| TC | A129_contig_246 | A129_contig_246_30 | 27630 | 28712 | + | 2.A.103.1.3 |
| CAZyme | A129_contig_246 | A129_contig_246_31 | 28779 | 29849 | + | GT28 |
Gene ID: A129_contig_246_26
Type: TC
Location: 24895 - 25620 (-)
Type: TC
Location: 24895 - 25620 (-)
Gene ID: A129_contig_246_27
Type: TC
Location: 25617 - 26276 (-)
Type: TC
Location: 25617 - 26276 (-)
Gene ID: A129_contig_246_28
Type: TF
Location: 26273 - 26542 (-)
Type: TF
Location: 26273 - 26542 (-)
Gene ID: A129_contig_246_29
Type: peptidase
Location: 26677 - 27459 (+)
Type: peptidase
Location: 26677 - 27459 (+)
Gene ID: A129_contig_246_30
Type: TC
Location: 27630 - 28712 (+)
Type: TC
Location: 27630 - 28712 (+)
Gene ID: A129_contig_246_31
Type: CAZyme
Location: 28779 - 29849 (+)
Type: CAZyme
Location: 28779 - 29849 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.