Cluster: A129.bin_1_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_292 | 313130 | 314581 | - | 8.A.59.2.1 |
| pfam | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_293 | 314571 | 315515 | - | Peripla_BP_4 |
| pfam | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_294 | 315841 | 316245 | - | bPH_4 |
| CAZyme | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_295 | 316556 | 321730 | - | GH84 |
Gene ID: A129_contig_32_corr_1_np12_292
Type: TC
Location: 313130 - 314581 (-)
Type: TC
Location: 313130 - 314581 (-)
Gene ID: A129_contig_32_corr_1_np12_293
Type: pfam
Location: 314571 - 315515 (-)
Type: pfam
Location: 314571 - 315515 (-)
Gene ID: A129_contig_32_corr_1_np12_294
Type: pfam
Location: 315841 - 316245 (-)
Type: pfam
Location: 315841 - 316245 (-)
Gene ID: A129_contig_32_corr_1_np12_295
Type: CAZyme
Location: 316556 - 321730 (-)
Type: CAZyme
Location: 316556 - 321730 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.