Cluster: A129.bin_1_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_267 | 285399 | 287279 | - | CBM48 | GH13_9 |
| pfam | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_268 | 287970 | 289673 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | A129_contig_32_corr_1_np12 | A129_contig_32_corr_1_np12_269 | 289813 | 290079 | - | 8.A.8.1.3 |
Gene ID: A129_contig_32_corr_1_np12_267
Type: CAZyme
Location: 285399 - 287279 (-)
Type: CAZyme
Location: 285399 - 287279 (-)
Gene ID: A129_contig_32_corr_1_np12_268
Type: pfam
Location: 287970 - 289673 (-)
Type: pfam
Location: 287970 - 289673 (-)
Gene ID: A129_contig_32_corr_1_np12_269
Type: TC
Location: 289813 - 290079 (-)
Type: TC
Location: 289813 - 290079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacterium
Species
Amedibacterium intestinale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.