Cluster: A111.bin_5_CGC8
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 10
- Substrate: beta-glucan
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_01079
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1206 | A111_contig_1206_435 | 569318 | 572158 | - | CBM6 | CE20 | GH43_16 |
| CAZyme | A111_contig_1206 | A111_contig_1206_436 | 572208 | 574598 | - | GH31_4 |
| CAZyme | A111_contig_1206 | A111_contig_1206_437 | 574613 | 576229 | - | GH29 |
| CAZyme | A111_contig_1206 | A111_contig_1206_438 | 576287 | 579394 | - | GH2 |
| CAZyme | A111_contig_1206 | A111_contig_1206_439 | 579417 | 581477 | - | GH42 |
| CAZyme | A111_contig_1206 | A111_contig_1206_440 | 581504 | 585229 | - | GH2 | GH2 |
| CAZyme | A111_contig_1206 | A111_contig_1206_441 | 585226 | 587298 | - | GH97 |
| CAZyme | A111_contig_1206 | A111_contig_1206_442 | 587330 | 588763 | - | GH5_4 |
| pfam | A111_contig_1206 | A111_contig_1206_443 | 588894 | 590351 | - | TIG | SGBP_B_XBD |
| pfam | A111_contig_1206 | A111_contig_1206_444 | 590392 | 592014 | - | SusD_RagB | SusD-like_3 |
| TC | A111_contig_1206 | A111_contig_1206_445 | 592058 | 595234 | - | 1.B.14.6.1 |
| TF | A111_contig_1206 | A111_contig_1206_446 | 595354 | 599364 | - | HTH_AraC |
| CAZyme | A111_contig_1206 | A111_contig_1206_447 | 599609 | 601606 | + | GH2 |
| CAZyme | A111_contig_1206 | A111_contig_1206_448 | 601688 | 602791 | - | GH43_33 |
Gene ID: A111_contig_1206_435
Type: CAZyme
Location: 569318 - 572158 (-)
Type: CAZyme
Location: 569318 - 572158 (-)
Gene ID: A111_contig_1206_436
Type: CAZyme
Location: 572208 - 574598 (-)
Type: CAZyme
Location: 572208 - 574598 (-)
Gene ID: A111_contig_1206_437
Type: CAZyme
Location: 574613 - 576229 (-)
Type: CAZyme
Location: 574613 - 576229 (-)
Gene ID: A111_contig_1206_438
Type: CAZyme
Location: 576287 - 579394 (-)
Type: CAZyme
Location: 576287 - 579394 (-)
Gene ID: A111_contig_1206_439
Type: CAZyme
Location: 579417 - 581477 (-)
Type: CAZyme
Location: 579417 - 581477 (-)
Gene ID: A111_contig_1206_440
Type: CAZyme
Location: 581504 - 585229 (-)
Type: CAZyme
Location: 581504 - 585229 (-)
Gene ID: A111_contig_1206_441
Type: CAZyme
Location: 585226 - 587298 (-)
Type: CAZyme
Location: 585226 - 587298 (-)
Gene ID: A111_contig_1206_442
Type: CAZyme
Location: 587330 - 588763 (-)
Type: CAZyme
Location: 587330 - 588763 (-)
Gene ID: A111_contig_1206_443
Type: pfam
Location: 588894 - 590351 (-)
Type: pfam
Location: 588894 - 590351 (-)
Gene ID: A111_contig_1206_444
Type: pfam
Location: 590392 - 592014 (-)
Type: pfam
Location: 590392 - 592014 (-)
Gene ID: A111_contig_1206_445
Type: TC
Location: 592058 - 595234 (-)
Type: TC
Location: 592058 - 595234 (-)
Gene ID: A111_contig_1206_446
Type: TF
Location: 595354 - 599364 (-)
Type: TF
Location: 595354 - 599364 (-)
Gene ID: A111_contig_1206_447
Type: CAZyme
Location: 599609 - 601606 (+)
Type: CAZyme
Location: 599609 - 601606 (+)
Gene ID: A111_contig_1206_448
Type: CAZyme
Location: 601688 - 602791 (-)
Type: CAZyme
Location: 601688 - 602791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.