Cluster: A111.bin_5_CGC69
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate: beta-glucan
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_00934
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_94 | 94143 | 97157 | + | GH3 |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_95 | 97178 | 100219 | + | GH3 |
| pfam | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_96 | 100327 | 100956 | - | OMP_b-brl |
| pfam | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_97 | 101080 | 101718 | - | DUF4136 |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_98 | 101910 | 103925 | - | GH97 |
| TC | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_99 | 103932 | 104936 | - | 8.A.5.1.3 |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_100 | 104955 | 107441 | - | GH94 |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_101 | 107664 | 110108 | + | GH2 |
| TF | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_102 | 110407 | 111300 | + | HTH_AraC | HTH_AraC |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_103 | 111373 | 112656 | + | CE7 |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_104 | 112748 | 114040 | + | GH5_7 |
| CAZyme | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_105 | 114153 | 115124 | + | GH5_2 |
| TC | A111_contig_6_corr_2_s0_np12 | A111_contig_6_corr_2_s0_np12_106 | 115417 | 118665 | + | 1.B.14.6.1 |
Gene ID: A111_contig_6_corr_2_s0_np12_94
Type: CAZyme
Location: 94143 - 97157 (+)
Type: CAZyme
Location: 94143 - 97157 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_95
Type: CAZyme
Location: 97178 - 100219 (+)
Type: CAZyme
Location: 97178 - 100219 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_96
Type: pfam
Location: 100327 - 100956 (-)
Type: pfam
Location: 100327 - 100956 (-)
Gene ID: A111_contig_6_corr_2_s0_np12_97
Type: pfam
Location: 101080 - 101718 (-)
Type: pfam
Location: 101080 - 101718 (-)
Gene ID: A111_contig_6_corr_2_s0_np12_98
Type: CAZyme
Location: 101910 - 103925 (-)
Type: CAZyme
Location: 101910 - 103925 (-)
Gene ID: A111_contig_6_corr_2_s0_np12_99
Type: TC
Location: 103932 - 104936 (-)
Type: TC
Location: 103932 - 104936 (-)
Gene ID: A111_contig_6_corr_2_s0_np12_100
Type: CAZyme
Location: 104955 - 107441 (-)
Type: CAZyme
Location: 104955 - 107441 (-)
Gene ID: A111_contig_6_corr_2_s0_np12_101
Type: CAZyme
Location: 107664 - 110108 (+)
Type: CAZyme
Location: 107664 - 110108 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_102
Type: TF
Location: 110407 - 111300 (+)
Type: TF
Location: 110407 - 111300 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_103
Type: CAZyme
Location: 111373 - 112656 (+)
Type: CAZyme
Location: 111373 - 112656 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_104
Type: CAZyme
Location: 112748 - 114040 (+)
Type: CAZyme
Location: 112748 - 114040 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_105
Type: CAZyme
Location: 114153 - 115124 (+)
Type: CAZyme
Location: 114153 - 115124 (+)
Gene ID: A111_contig_6_corr_2_s0_np12_106
Type: TC
Location: 115417 - 118665 (+)
Type: TC
Location: 115417 - 118665 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.