Cluster: A111.bin_5_CGC68
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_06557
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1048 | A111_contig_1048_3079 | 3634950 | 3636242 | + | CE7 |
| CAZyme | A111_contig_1048 | A111_contig_1048_3080 | 3636257 | 3638251 | + | GH97 |
| CAZyme | A111_contig_1048 | A111_contig_1048_3081 | 3638309 | 3640087 | + | GH2 |
| CAZyme | A111_contig_1048 | A111_contig_1048_3082 | 3640084 | 3642804 | + | GH2 |
| pfam | A111_contig_1048 | A111_contig_1048_3083 | 3642816 | 3643586 | + | BetaGal_ABD_1 | BetaGal_gal-bd |
| CAZyme | A111_contig_1048 | A111_contig_1048_3084 | 3643693 | 3645903 | + | GH3 |
| TF | A111_contig_1048 | A111_contig_1048_3085 | 3645973 | 3646521 | - | GerE |
| STP | A111_contig_1048 | A111_contig_1048_3086 | 3646675 | 3647694 | + | FecR |
| TC | A111_contig_1048 | A111_contig_1048_3087 | 3647801 | 3651040 | + | 1.B.14.6.1 |
| TC | A111_contig_1048 | A111_contig_1048_3088 | 3651062 | 3652678 | + | 8.A.46.1.6 |
| CAZyme | A111_contig_1048 | A111_contig_1048_3089 | 3652803 | 3655355 | + | GH105 |
Gene ID: A111_contig_1048_3079
Type: CAZyme
Location: 3634950 - 3636242 (+)
Type: CAZyme
Location: 3634950 - 3636242 (+)
Gene ID: A111_contig_1048_3080
Type: CAZyme
Location: 3636257 - 3638251 (+)
Type: CAZyme
Location: 3636257 - 3638251 (+)
Gene ID: A111_contig_1048_3081
Type: CAZyme
Location: 3638309 - 3640087 (+)
Type: CAZyme
Location: 3638309 - 3640087 (+)
Gene ID: A111_contig_1048_3082
Type: CAZyme
Location: 3640084 - 3642804 (+)
Type: CAZyme
Location: 3640084 - 3642804 (+)
Gene ID: A111_contig_1048_3083
Type: pfam
Location: 3642816 - 3643586 (+)
Type: pfam
Location: 3642816 - 3643586 (+)
Gene ID: A111_contig_1048_3084
Type: CAZyme
Location: 3643693 - 3645903 (+)
Type: CAZyme
Location: 3643693 - 3645903 (+)
Gene ID: A111_contig_1048_3085
Type: TF
Location: 3645973 - 3646521 (-)
Type: TF
Location: 3645973 - 3646521 (-)
Gene ID: A111_contig_1048_3086
Type: STP
Location: 3646675 - 3647694 (+)
Type: STP
Location: 3646675 - 3647694 (+)
Gene ID: A111_contig_1048_3087
Type: TC
Location: 3647801 - 3651040 (+)
Type: TC
Location: 3647801 - 3651040 (+)
Gene ID: A111_contig_1048_3088
Type: TC
Location: 3651062 - 3652678 (+)
Type: TC
Location: 3651062 - 3652678 (+)
Gene ID: A111_contig_1048_3089
Type: CAZyme
Location: 3652803 - 3655355 (+)
Type: CAZyme
Location: 3652803 - 3655355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.